Genomes encoding eukaryotic-like proteins
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Copy number in non-pathogens:
Mean=0.40 Stddev=1.07
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Haloferula sp. BvORR071 | s | 4 | 5 |
Microcystis aeruginosa NIES-843 | s | 4 | 5 |
Rivularia sp. PCC 7116 | s | 5 | 6 |
Leptolyngbya boryana PCC 6306 | s | 6 | 7 |
Calothrix sp. PCC 7103 | s | 8 | 9 |
Calothrix sp. PCC 6303 | s | 4 | 5 |
Pleurocapsa sp. PCC 7319 | s | 5 | 6 |
Synechococcus sp. PCC 7335 | s | 4 | 5 |
Bacteroides nordii CL02T12C05 | s | 4 | 5 |
Vibrio mimicus VM573 | s | 5 | 6 |
Bacteroides sp. HPS0048 | s | 4 | 5 |
Nostoc punctiforme PCC 73102 | s | 4 | 5 |
'Nostoc azollae' 0708 | s | 4 | 5 |
Acaryochloris marina MBIC11017 | s | 9 | 11 |
Myxosarcina sp. GI1 | s | 5 | 6 |
Vibrio mimicus | s | 5 | 6 |
Nostoc sp. KVJ20 | s | 5 | 6 |
*p=pathogen;s=symbiont