Effective results for Clostridium botulinum BKT015925 (eggnog40)

Summary

Number of putative secreted proteins: 56
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 56 proteins (0 high, 56 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
929506.CbC4_1079(PF01477) (PF00882)ER
929506.CbC4_0821(PF00882)mitochondrial
929506.CbC4_2317(PF01633)(mitochondrial)
929506.CbC4_0256(PF00163)mitochondrial
929506.CbC4_0043(PF09818)(mitochondrial)
929506.CbC4_1642(PF16472)ER
929506.CbC4_2037(PF08367)ER
929506.CbC4_0094(PF14566)ER
929506.CbC4_1626(PF00163)mitochondrial
929506.CbC4_0337(PF01228) (PF02901)
929506.CbC4_1793(PF01228) (PF02901)
929506.CbC4_1610(PF01228) (PF02901)
929506.CbC4_2142(PF01228) (PF02901)
929506.CbC4_1734(PF01228) (PF02901)
929506.CbC4_0969(PF05598)
929506.CbC4_0828(PF01991)
929506.CbC4_1196(PF01695)
929506.CbC4_0136(PF02906)
929506.CbC4_1748(PF01695)
929506.CbC4_1525(PF02906)
929506.CbC4_0120(PF05598)
929506.CbC4_1020(PF01695)
929506.CbC4_2302(PF01633)
929506.CbC4_2231(PF05598)
929506.CbC4_0260(PF09818)
929506.CbC4_1121(PF01633)
929506.CbC4_0930(PF05598)
929506.CbC4_0041(PF01695)
929506.CbC4_0302(PF05598)
929506.CbC4_0696(PF05598)
929506.CbC4_2211(PF02906)
929506.CbC4_1271(PF05598)
929506.CbC4_1277(PF01695)
929506.CbC4_1866(PF05598)
929506.CbC4_0731(PF16472)
929506.CbC4_0845(PF08367)
929506.CbC4_2346(PF07892)
929506.CbC4_1671(PF05598)
929506.CbC4_2018(PF12638)
929506.CbC4_2391(PF05598)
929506.CbC4_0883(PF01695)
929506.CbC4_0889(PF02906)
929506.CbC4_2022(PF05598)
929506.CbC4_2029(PF05598)
929506.CbC4_2387(PF12646)
929506.CbC4_0091(PF05598)
929506.CbC4_2046(PF01695)
929506.CbC4_1960(PF02906)
929506.CbC4_0948(PF05598)
929506.CbC4_0941(PF01695)
929506.CbC4_1564(PF05598)
929506.CbC4_2057(PF05598)
929506.CbC4_2532(PF07892)
929506.CbC4_0623(PF16472)
929506.CbC4_1398(PF01695)
929506.CbC4_0973(PF05598)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================