Effective results for Butyrivibrio fibrisolvens 16/4 (eggnog40)

Summary

Number of putative secreted proteins: 40
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 20 eukaryotic-like domains, contained in 40 proteins (8 high, 32 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
657324.CIY_01840PF01637(mitochondrial)
657324.CIY_26590PF03151ER
657324.CIY_27230(PF14022)mitochondrial
657324.CIY_12070(PF06165) (PF17167)
657324.CIY_26940PF01637(plastid)
657324.CIY_05430(PF06165) (PF17167)
657324.CIY_16740PF01637
657324.CIY_29830PF00165
657324.CIY_22090(PF04961)
657324.CIY_13150PF01637
657324.CIY_07280(PF17167)
657324.CIY_14910(PF01795)
657324.CIY_12970(PF07517)
657324.CIY_12960(PF07517)
657324.CIY_22370(PF01795)
657324.CIY_13560(PF17032)
657324.CIY_07270(PF06165)
657324.CIY_18480(PF00625)
657324.CIY_29880(PF01969)not used
657324.CIY_15190(PF12437)
657324.CIY_34520PF00165
657324.CIY_18470(PF00625)
657324.CIY_25780(PF09359)
657324.CIY_30230(PF00625)
657324.CIY_14490(PF01487)
657324.CIY_08790(PF13151)
657324.CIY_09680(PF01937)
657324.CIY_02620(PF12437)
657324.CIY_09690(PF01937)
657324.CIY_29460(PF14249)
657324.CIY_27180(PF14022)
657324.CIY_13830(PF17032)
657324.CIY_29870(PF01969)
657324.CIY_21460(PF09359)
657324.CIY_22100(PF04961)not used
657324.CIY_00570PF01637
657324.CIY_01510(PF12640)
657324.CIY_28510(PF14938)
657324.CIY_29240(PF07517)
657324.CIY_14470(PF01487)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================