Effective results for Bacillus cellulosilyticus DSM 2522 (eggnog40)

Summary

Number of putative secreted proteins: 38
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 16 eukaryotic-like domains, contained in 38 proteins (3 high, 35 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
649639.Bcell_3504(PF02055) (PF17189)ER
649639.Bcell_1280(PF02018) PF03639ER
649639.Bcell_1304(PF04519)ER
649639.Bcell_0541(PF02018)ER
649639.Bcell_3787(PF03714)ER
649639.Bcell_3788(PF03714)ER
649639.Bcell_2237(PF03851)mitochondrial
649639.Bcell_0683(PF02018)ER
649639.Bcell_0782(PF06695)ER
649639.Bcell_0690(PF02018)ER
649639.Bcell_3455(PF00344)mitochondrial
649639.Bcell_4185PF03639ER
649639.Bcell_0524(PF02018)ER
649639.Bcell_0523(PF00079)ER
649639.Bcell_0476(PF02681)ER
649639.Bcell_3398(PF02681)ER
649639.Bcell_3802(PF16472)ER
649639.Bcell_3729PF03639ER
649639.Bcell_4034(PF16472)ER
649639.Bcell_0821(PF02055) (PF17189)
649639.Bcell_2789(PF03059)(mitochondrial)
649639.Bcell_0689(PF02055) (PF17189)
649639.Bcell_3505(PF02055) (PF17189)
649639.Bcell_4014(PF13518)
649639.Bcell_2361(PF04519)
649639.Bcell_0814(PF06695)
649639.Bcell_0142(PF00344)
649639.Bcell_2056(PF04519)
649639.Bcell_1026(PF13518)
649639.Bcell_3999(PF13518)
649639.Bcell_3873(PF13518)
649639.Bcell_3264(PF05495)
649639.Bcell_3468(PF04519)
649639.Bcell_1249(PF13518)
649639.Bcell_3390(PF00079)
649639.Bcell_3832(PF13518)
649639.Bcell_1077(PF12638)
649639.Bcell_1997(PF03851)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================