Effective results for Jonquetella anthropi E3_33 E1 (eggnog40)

Summary

Number of putative secreted proteins: 42
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 42 proteins (13 high, 29 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
645512.GCWU000246_00809PF03577ER
645512.GCWU000246_00208(PF05684)(ER)
645512.GCWU000246_00151(PF13518)(mitochondrial)
645512.GCWU000246_00094PF03577ER
645512.GCWU000246_01737(PF00137)ER
645512.GCWU000246_00615(PF05684)ER
645512.GCWU000246_01396PF03577ER
645512.GCWU000246_01397PF03577ER
645512.GCWU000246_00116(PF13518)(mitochondrial)
645512.GCWU000246_01508PF03577ER
645512.GCWU000246_01515PF02987ER
645512.GCWU000246_00806(PF00137)(ER)
645512.GCWU000246_01811PF03577ER
645512.GCWU000246_00490(PF00137)ER
645512.GCWU000246_00782PF03577ER
645512.GCWU000246_01807PF03577ER
645512.GCWU000246_01000(PF07837) (PF02971)
645512.GCWU000246_00165(PF07837) (PF02971)
645512.GCWU000246_00466(PF13518)plastid
645512.GCWU000246_01002(PF04961)
645512.GCWU000246_00991(PF13518)
645512.GCWU000246_01675PF01129
645512.GCWU000246_01583(PF03382)
645512.GCWU000246_01582(PF03382)
645512.GCWU000246_01580(PF03382)
645512.GCWU000246_01587(PF03382)
645512.GCWU000246_01586(PF03382)
645512.GCWU000246_01585(PF03382)
645512.GCWU000246_00092PF12873
645512.GCWU000246_01736(PF01496)
645512.GCWU000246_01738(PF01991)
645512.GCWU000246_00546(PF04961)
645512.GCWU000246_01579(PF03382)
645512.GCWU000246_00369(PF13518)
645512.GCWU000246_00008PF01129
645512.GCWU000246_00647(PF07787)
645512.GCWU000246_00790(PF13518)not used
645512.GCWU000246_00491(PF01496)
645512.GCWU000246_00497PF03577
645512.GCWU000246_00472(PF13518)
645512.GCWU000246_00861(PF13518)
645512.GCWU000246_01028(PF14336)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================