Effective results for Anaplasma centrale str. Israel (eggnog40)

Summary

Number of putative secreted proteins: 41
- Predicted by T4SEpre: 53
- Predicted by EffectiveELD: 2 eukaryotic-like domains, contained in 4 proteins (0 high, 4 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type IV

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
574556.ACIS_00679+ER
574556.ACIS_00094+ER
574556.ACIS_00254+ER
574556.ACIS_00938+mitochondrial; (mitochondrial)
574556.ACIS_00495+ER
574556.ACIS_00250+ER
574556.ACIS_00471+mitochondrial; (mitochondrial)
574556.ACIS_01157+ER
574556.ACIS_00059+(mitochondrial)
574556.ACIS_00540+(mitochondrial)
574556.ACIS_00484(PF01018)mitochondrial
574556.ACIS_00915+
574556.ACIS_00764+
574556.ACIS_00420+
574556.ACIS_00022+
574556.ACIS_00814+
574556.ACIS_00788+
574556.ACIS_00779+
574556.ACIS_00095(PF00707)
574556.ACIS_00858+
574556.ACIS_00150+
574556.ACIS_00732+
574556.ACIS_00746+
574556.ACIS_00365+
574556.ACIS_00946+
574556.ACIS_00945+
574556.ACIS_00943+
574556.ACIS_00700+
574556.ACIS_00127(PF00707)
574556.ACIS_00010+
574556.ACIS_00237+
574556.ACIS_00236+
574556.ACIS_00105+
574556.ACIS_01128+
574556.ACIS_00951+
574556.ACIS_01029+
574556.ACIS_01150+
574556.ACIS_01093+
574556.ACIS_01097+
574556.ACIS_01095+
574556.ACIS_00714(PF01018)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 1.3 (13/10 KEGG proteins)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================