Effective results for Tepidanaerobacter acetatoxydans (eggnog40)

Summary

Number of putative secreted proteins: 35
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 35 proteins (3 high, 32 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
499229.TepRe1_0593(PF06071)(mitochondrial)
499229.TepRe1_2076(PF01813)(mitochondrial); mitochondrial
499229.TepRe1_1567PF03727 PF00349
499229.TepRe1_0775(PF07837) (PF02971)
499229.TepRe1_0115(PF05034) (PF07476)
499229.TepRe1_2310(PF08357)
499229.TepRe1_2312PF12569
499229.TepRe1_0552(PF04961)
499229.TepRe1_1752(PF09861)
499229.TepRe1_2081(PF01991)
499229.TepRe1_2080(PF01992)
499229.TepRe1_2083(PF01496)
499229.TepRe1_0777(PF04961)
499229.TepRe1_0574(PF07892)
499229.TepRe1_0117(PF14330)
499229.TepRe1_2078(PF16886)
499229.TepRe1_2079(PF01990)
499229.TepRe1_0137(PF09861)
499229.TepRe1_2272(PF09861)
499229.TepRe1_0422(PF03266)
499229.TepRe1_0508(PF01992)
499229.TepRe1_0677(PF01409)
499229.TepRe1_0678(PF01409)
499229.TepRe1_2020(PF09861)
499229.TepRe1_0509(PF01496)
499229.TepRe1_1805(PF09861)
499229.TepRe1_0511(PF01990)
499229.TepRe1_0513(PF16886)
499229.TepRe1_0512(PF01991)
499229.TepRe1_0515(PF01813)
499229.TepRe1_0859PF04803
499229.TepRe1_2214(PF07892)
499229.TepRe1_0455(PF02475)
499229.TepRe1_0849(PF06071)
499229.TepRe1_0304(PF04961)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================