Effective results for Cyanothece sp. ATCC 51142 (eggnog40)

Summary

Number of putative secreted proteins: 509
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 182 eukaryotic-like domains, contained in 509 proteins (52 high, 457 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
43989.cce_2410(PF00060) (PF07885)ER
43989.cce_4662(PF04422) (PF04432)(mitochondrial)
43989.cce_4583(PF00060) (PF07885)ER
43989.cce_3498PF08527 (PF03068)(mitochondrial)
43989.cce_3196(PF00145)(mitochondrial)
43989.cce_3735(PF11016)ER
43989.cce_4529(PF00805)ER
43989.cce_4455(PF01761)mitochondrial; (mitochondrial)
43989.cce_5101(PF00805)(mitochondrial)
43989.cce_0630(PF02163)ER
43989.cce_3432(PF02163)(ER); ER
43989.cce_1163(PF12849)ER
43989.cce_4846(PF01926)(mitochondrial)
43989.cce_3083(PF00805)ER
43989.cce_0193(PF12740)ER; (ER)
43989.cce_3155(PF07927)mitochondrial
43989.cce_0287(PF03040)(mitochondrial)
43989.cce_1489(PF00490)(mitochondrial); mitochondrial
43989.cce_2129(PF11460)ER
43989.cce_2052(PF07466)ER
43989.cce_2728(PF13301)ER
43989.cce_2545(PF07885)mitochondrial
43989.cce_0764(PF09295)(mitochondrial)
43989.cce_3147(PF01926)ER
43989.cce_1369(PF07444)ER
43989.cce_0388(PF00690) PF13246 (PF00689)
43989.cce_2606(PF00690) PF13246 (PF00689)
43989.cce_3395(PF11909)mitochondrial
43989.cce_0776PF05757ER
43989.cce_2952(PF01679)ER; (ER)
43989.cce_2959(PF16639) (PF01333)(mitochondrial)
43989.cce_0804(PF01789)ER
43989.cce_1958(PF07927)(mitochondrial)
43989.cce_1604(PF00224)mitochondrial; (mitochondrial)
43989.cce_4381(PF00924)ER
43989.cce_2385(PF00924)ER
43989.cce_1546PF10639ER
43989.cce_0017(PF02163)ER
43989.cce_0129(PF11805)(ER)
43989.cce_1617(PF12740)mitochondrial
43989.cce_1050(PF12159)ER
43989.cce_2393(PF07927)(mitochondrial)
43989.cce_2572(PF01716)ER
43989.cce_3977(PF03055)(mitochondrial)
43989.cce_2885(PF00924)mitochondrial
43989.cce_0001PF03982ER
43989.cce_0489(PF00924)(mitochondrial)
43989.cce_1849(PF11910)(mitochondrial)
43989.cce_2720(PF12263)ER
43989.cce_4233(PF05685)ER
43989.cce_2984(PF13449)ER
43989.cce_2980(PF00924)(ER); ER
43989.cce_1290(PF02507)ER
43989.cce_3633(PF13326)ER
43989.cce_1859(PF12849)ER; (ER)
43989.cce_4229(PF13358)(mitochondrial)
43989.cce_1272(PF00805)ER
43989.cce_5197(PF12849)ER; (ER)
43989.cce_5177(PF00224)mitochondrial
43989.cce_3916(PF00690) PF13246 (PF00689)
43989.cce_2178(PF07927)(mitochondrial)
43989.cce_0737(PF07444)ER; (ER)
43989.cce_0029(PF00805)ER
43989.cce_0209(PF00924)ER; (ER)
43989.cce_4694(PF05419)ER
43989.cce_3909(PF11152)ER
43989.cce_0436(PF03647)ER
43989.cce_0905(PF00805)ER; (ER)
43989.cce_0874(PF13301)ER
43989.cce_1659(PF00490)(mitochondrial); mitochondrial
43989.cce_1896(PF05023)ER
43989.cce_4119(PF02163)(ER); ER
43989.cce_4680(PF01737)ER
43989.cce_4759(PF03098)(ER)
43989.cce_4755(PF05685)(mitochondrial)
43989.cce_2539(PF01007)ER
43989.cce_3804(PF13358)(mitochondrial)
43989.cce_3487(PF04983)(mitochondrial)
43989.cce_0045(PF13358)(mitochondrial)
43989.cce_3064(PF07927)mitochondrial; (mitochondrial)
43989.cce_0260(PF01926)(mitochondrial); (plastid)
43989.cce_4307(PF03098)ER
43989.cce_1139(PF12849)ER
43989.cce_5143PF00058ER
43989.cce_5094(PF12740)ER
43989.cce_3329(PF12046)ER
43989.cce_3255(PF00690) PF13246 (PF00689)
43989.cce_0071(PF01926)ER
43989.cce_0072(PF02325)(ER)
43989.cce_3673PF04278ER
43989.cce_3672PF04278ER
43989.cce_3676(PF00924)mitochondrial
43989.cce_0783(PF00924)(mitochondrial)
43989.cce_0522(PF05050)ER
43989.cce_0521(PF05050)(mitochondrial)
43989.cce_1120(PF13449)ER
43989.cce_4403(PF00805)ER
43989.cce_2334(PF03567)(ER)
43989.cce_3865(PF13358)(mitochondrial)
43989.cce_2848(PF07927)(mitochondrial)
43989.cce_4887PF03982ER
43989.cce_0067(PF00690) PF13246 (PF00689)
43989.cce_1425(PF05685)mitochondrial
43989.cce_0400(PF01241)(ER); plastid
43989.cce_0403(PF00924)ER
43989.cce_0886(PF12849)mitochondrial; (mitochondrial)
43989.cce_0650(PF02325)ER
43989.cce_1219(PF07927)(mitochondrial)
43989.cce_4429(PF03567)(mitochondrial); mitochondrial
43989.cce_5202(PF00690) PF13246 (PF00689)
43989.cce_5061(PF00773)mitochondrial; (mitochondrial)
43989.cce_3993(PF00145)(ER)
43989.cce_2267(PF02163)ER
43989.cce_0640(PF13613)(mitochondrial)
43989.cce_3420(PF00224)(mitochondrial)
43989.cce_3736(PF13301)(ER)
43989.cce_4857(PF07683) (PF02492)
43989.cce_2078(PF07082)(ER)
43989.cce_4441(PF02468)ER; not used
43989.cce_4440(PF01761)plastid
43989.cce_4848(PF07683) (PF02492)
43989.cce_4843(PF07683) (PF02492)
43989.cce_3227(PF07683) (PF02492)
43989.cce_2285(PF00690) (PF00689)
43989.cce_1805(PF05969)ER; not used
43989.cce_0280(PF13911)(mitochondrial)
43989.cce_1487(PF08662)(mitochondrial)
43989.cce_1488(PF07683) (PF02492)
43989.cce_1027PF13384 (PF13592)
43989.cce_3239(PF07466)(mitochondrial)
43989.cce_0618(PF05685)(ER)
43989.cce_0148(PF00690) (PF00689)
43989.cce_1490(PF07683) (PF02492)
43989.cce_4280(PF00101)(mitochondrial)
43989.cce_4511(PF00145)(ER)
43989.cce_0602(PF00504)(mitochondrial)
43989.cce_1952(PF12452)(ER)
43989.cce_3607(PF03894) (PF09364)
43989.cce_4816(PF09990)(ER)
43989.cce_2092(PF13613)(mitochondrial)
43989.cce_1836(PF07927)(mitochondrial)
43989.cce_2628(PF05685)plastid
43989.cce_2404(PF05050)(plastid)
43989.cce_1491(PF07683) (PF02492)
43989.cce_2979PF13384 (PF13592)
43989.cce_0487(PF01192)(mitochondrial)
43989.cce_1289(PF01701)ER; not used
43989.cce_4725(PF00685)(mitochondrial)
43989.cce_4834(PF07683) (PF02492)
43989.cce_4833(PF07683) (PF02492)
43989.cce_2504(PF13613)(mitochondrial)
43989.cce_3101(PF00076)(ER)
43989.cce_1187(PF07683) (PF02492)
43989.cce_4007(PF00805)(mitochondrial)
43989.cce_4223(PF02931) PF02932
43989.cce_3352(PF04422) (PF04432)
43989.cce_0736(PF06596)ER; not used
43989.cce_0113(PF00773)(plastid)
43989.cce_3110(PF05277)(mitochondrial)
43989.cce_5184(PF09364) (PF03894)
43989.cce_1500(PF07683) (PF02492)
43989.cce_3013(PF00805)(mitochondrial)
43989.cce_1092(PF01679)ER; not used
43989.cce_5085PF13384 (PF13592)
43989.cce_2225(PF09364) (PF03894)
43989.cce_1136(PF01926)(mitochondrial)
43989.cce_5095(PF05685)(ER)
43989.cce_3786(PF13613)(mitochondrial)
43989.cce_3479PF13384 (PF13592)
43989.cce_1305(PF00283)(ER); not used
43989.cce_1307(PF00284) (PF00283)
43989.cce_5134(PF13613)(mitochondrial)
43989.cce_5045(PF12204)(plastid)
43989.cce_0999(PF01241)(plastid)
43989.cce_3265(PF02529)ER; not used
43989.cce_4325(PF02427)(mitochondrial)
43989.cce_3308(PF13613)(mitochondrial)
43989.cce_3278(PF13613)(mitochondrial)
43989.cce_1696PF13384 (PF13592)
43989.cce_1819(PF00924)(ER)
43989.cce_5204(PF00690) (PF00689)
43989.cce_5117(PF13613)(mitochondrial)
43989.cce_2460(PF13613)(mitochondrial)
43989.cce_3199PF13384
43989.cce_3197(PF13358)
43989.cce_0422(PF06745)
43989.cce_0513(PF05711)
43989.cce_1599(PF03912)
43989.cce_1591(PF05685)
43989.cce_0352(PF05685)
43989.cce_4636(PF00805)
43989.cce_1172(PF00610)
43989.cce_4528(PF00707)
43989.cce_4451(PF15071)
43989.cce_4852(PF00490)
43989.cce_2459PF13359
43989.cce_3982(PF12849)
43989.cce_3853PF13384
43989.cce_3851(PF13358)
43989.cce_3855(PF13358)
43989.cce_2581(PF07927)
43989.cce_3211(PF05685)
43989.cce_4057(PF05685)
43989.cce_4054(PF05685)
43989.cce_0639PF13359
43989.cce_0989(PF00223)
43989.cce_0985(PF05685)
43989.cce_0631(PF05685)
43989.cce_0636(PF00124)
43989.cce_3501(PF00124)
43989.cce_3181(PF00805)
43989.cce_0187(PF13358)
43989.cce_0189PF13384
43989.cce_2929(PF00805)
43989.cce_1341(PF02531)
43989.cce_0291(PF13355)
43989.cce_1904(PF01947)
43989.cce_0168(PF02672)
43989.cce_4623(PF08417)
43989.cce_1167(PF11347)
43989.cce_4530(PF05685)
43989.cce_0512(PF05050)
43989.cce_4446PF03742not used
43989.cce_1013(PF00076)
43989.cce_2666(PF03092)
43989.cce_2665(PF03055)
43989.cce_2594(PF08847)
43989.cce_2064(PF00805)
43989.cce_0629(PF02672)
43989.cce_3089(PF11947)
43989.cce_0990(PF00223)
43989.cce_0625(PF05685)
43989.cce_3154(PF02941)
43989.cce_1807PF04755
43989.cce_1571(PF12527)
43989.cce_1979(PF00805)
43989.cce_0377(PF05050)
43989.cce_1483(PF00924)
43989.cce_1480(PF03652)
43989.cce_4617(PF08854)
43989.cce_4619(PF10999)
43989.cce_4294(PF05419)
43989.cce_1393(PF11051)
43989.cce_4270(PF05685)
43989.cce_4271(PF00805)
43989.cce_1026(PF13358)
43989.cce_4476(PF10184)
43989.cce_2128(PF10716)
43989.cce_2055(PF08853)
43989.cce_2723(PF16166)
43989.cce_3893(PF05685)
43989.cce_0611(PF11965)
43989.cce_0762(PF00924)
43989.cce_3410(PF08802)
43989.cce_2943(PF00805)
43989.cce_0819(PF12095)
43989.cce_1565(PF07885)
43989.cce_3703(PF05685)
43989.cce_1961(PF01926)
43989.cce_1963(PF08417)
43989.cce_1964PF04755
43989.cce_0140(PF05685)
43989.cce_0143(PF05685)
43989.cce_0146(PF00076)
43989.cce_1147(PF05685)
43989.cce_4518(PF02533)not used
43989.cce_4269(PF00685)
43989.cce_3809(PF12204)
43989.cce_2551(PF00145)
43989.cce_2552(PF04455)
43989.cce_3552(PF13358)
43989.cce_3550PF13384
43989.cce_3554(PF10013)not used
43989.cce_3398(PF02943)
43989.cce_3394(PF02532)not used
43989.cce_3393(PF12600)
43989.cce_3171(PF01926)
43989.cce_2958(PF08802)
43989.cce_1820(PF00924)
43989.cce_1557(PF00805)
43989.cce_1559PF02005
43989.cce_1732(PF01969)
43989.cce_1733(PF01969)
43989.cce_0392(PF01405)not used
43989.cce_0399(PF01094)
43989.cce_3609(PF05685)
43989.cce_1040(PF01926)
43989.cce_4817(PF09990)
43989.cce_3411(PF00124)
43989.cce_4926(PF05685)
43989.cce_4927(PF03055)
43989.cce_5038(PF07927)
43989.cce_2704(PF05685)
43989.cce_2708(PF00805)
43989.cce_2099(PF05050)
43989.cce_4244(PF13358)
43989.cce_2093PF13359
43989.cce_4712(PF13358)
43989.cce_2149(PF05685)
43989.cce_3549(PF05711)
43989.cce_0947(PF05685)
43989.cce_2894(PF05685)
43989.cce_0701(PF00224)
43989.cce_3165(PF02341)
43989.cce_3164(PF00101)
43989.cce_1545(PF00805)
43989.cce_1543(PF00504)not used
43989.cce_0837PF03982
43989.cce_1943(PF09366)
43989.cce_1942(PF00076)
43989.cce_0492(PF00805)
43989.cce_1726(PF05685)
43989.cce_3619(PF05685)
43989.cce_0231(PF01192)
43989.cce_4716(PF06745)
43989.cce_4242(PF13358)
43989.cce_4713(PF13592)
43989.cce_4240PF13384
43989.cce_1051(PF05685)
43989.cce_1058(PF06799)
43989.cce_4397(PF00805)
43989.cce_4661(PF05685)
43989.cce_2623(PF01926)
43989.cce_2625(PF06514)
43989.cce_2576(PF05685)
43989.cce_2578(PF00707)
43989.cce_2089(PF10162)
43989.cce_3979(PF00805)
43989.cce_3570PF04755
43989.cce_2978(PF13358)
43989.cce_2972(PF13358)
43989.cce_3752(PF10693)
43989.cce_3598(PF07885)
43989.cce_3595(PF05542)
43989.cce_0488(PF05419)
43989.cce_0485(PF01926)
43989.cce_1288PF00305
43989.cce_0131(PF12049)
43989.cce_1666(PF01926)
43989.cce_4836(PF05685)
43989.cce_0028(PF05685)
43989.cce_4905(PF01007)
43989.cce_2503PF13359
43989.cce_3964(PF02605)
43989.cce_3963(PF02605)
43989.cce_3962(PF00796)not used
43989.cce_3562(PF00805)
43989.cce_3561(PF00805)
43989.cce_3566(PF05685)
43989.cce_3362(PF08855)
43989.cce_3102(PF00805)
43989.cce_3299(PF10674)
43989.cce_1526(PF06298)not used
43989.cce_3583(PF00504)not used
43989.cce_1984(PF05685)
43989.cce_0454(PF11341)
43989.cce_0102(PF00076)
43989.cce_1672(PF08975)
43989.cce_1677(PF10063)
43989.cce_4001(PF06745)
43989.cce_1076(PF05419)
43989.cce_4358(PF11965)
43989.cce_4826(PF00504)
43989.cce_2371(PF11210)
43989.cce_2774(PF00924)
43989.cce_2515(PF03055)
43989.cce_2519(PF12263)
43989.cce_2172(PF02392)
43989.cce_2204(PF00685)
43989.cce_2202(PF05685)
43989.cce_0932PF13384
43989.cce_0934(PF13358)
43989.cce_0846(PF00690)
43989.cce_0025(PF05685)
43989.cce_0362(PF04423)
43989.cce_0111(PF05685)
43989.cce_0441(PF11264)
43989.cce_0116(PF13301)
43989.cce_4585(PF00924)
43989.cce_4580PF01744
43989.cce_4581(PF00805)
43989.cce_1082(PF05685)
43989.cce_1248(PF07885)
43989.cce_4106(PF09990)
43989.cce_4107(PF09990)
43989.cce_4108(PF09990)
43989.cce_4366(PF05685)not used
43989.cce_4698(PF09353)
43989.cce_4210(PF00805)
43989.cce_4212(PF00805)
43989.cce_4745(PF00145)
43989.cce_2694(PF11378)
43989.cce_5161PF13359
43989.cce_1924(PF01926)
43989.cce_3900(PF11267)
43989.cce_3346(PF00773)
43989.cce_3831(PF02656)
43989.cce_2520(PF04483)
43989.cce_3838(PF04983)
43989.cce_3123(PF00685)
43989.cce_3122(PF01761)
43989.cce_1504(PF07927)
43989.cce_0057(PF12576)
43989.cce_3658(PF11317)
43989.cce_1652PF01744
43989.cce_0278(PF00805)
43989.cce_4596(PF01926)
43989.cce_1090(PF03522)
43989.cce_4377(PF06485)
43989.cce_4683(PF00924)
43989.cce_2753(PF05685)
43989.cce_5084(PF13358)
43989.cce_2350(PF12617)
43989.cce_3336(PF00076)
43989.cce_3806PF13384
43989.cce_3808(PF13358)
43989.cce_3247(PF05685)
43989.cce_0917(PF05685)
43989.cce_0047(PF00805)not used
43989.cce_3793PF13384
43989.cce_1404(PF05685)
43989.cce_1405(PF05685)
43989.cce_0463(PF03652)
43989.cce_3464(PF02325)
43989.cce_0868(PF05685)
43989.cce_0862(PF11833)
43989.cce_0860(PF00737)
43989.cce_0864(PF05685)
43989.cce_0267(PF00124)
43989.cce_2440(PF00924)
43989.cce_4411(PF05685)
43989.cce_2030(PF05685)
43989.cce_2320(PF05685)
43989.cce_2321(PF05685)
43989.cce_3495(PF13449)
43989.cce_3494(PF13449)
43989.cce_3785PF13359
43989.cce_3072(PF05685)
43989.cce_0785(PF05685)
43989.cce_3477(PF00124)
43989.cce_3473(PF00145)
43989.cce_0893(PF05151)not used
43989.cce_1304PF02419not used
43989.cce_1303(PF01788)not used
43989.cce_0526(PF05050)
43989.cce_0255(PF11623)not used
43989.cce_0090(PF00805)
43989.cce_4574(PF00924)
43989.cce_1237(PF05419)
43989.cce_1236(PF05685)
43989.cce_5133PF13359
43989.cce_4799(PF00805)
43989.cce_2025(PF05685)
43989.cce_2792(PF03912)
43989.cce_2791(PF08041)not used
43989.cce_3863PF13384
43989.cce_3861(PF13358)
43989.cce_4333(PF05685)
43989.cce_0660(PF00124)
43989.cce_3689(PF14249)
43989.cce_3447(PF05685)
43989.cce_0887(PF12849)
43989.cce_1330(PF04481)
43989.cce_0247(PF00924)
43989.cce_0088(PF11371)
43989.cce_4548(PF05421)
43989.cce_1753(PF04839)
43989.cce_2013(PF06485)
43989.cce_3157(PF00773)
43989.cce_3302(PF05685)
43989.cce_3307PF13359
43989.cce_3305(PF05685)
43989.cce_3877(PF00924)
43989.cce_3279PF13359
43989.cce_3272(PF00805)
43989.cce_1925(PF01926)
43989.cce_1927(PF11998)
43989.cce_0430(PF05542)
43989.cce_3694(PF09366)
43989.cce_3450(PF05685)
43989.cce_2903(PF02492)
43989.cce_1328(PF01926)
43989.cce_1327(PF05685)
43989.cce_1213(PF00145)
43989.cce_1216(PF05685)
43989.cce_1742(PF05685)
43989.cce_1697(PF13358)
43989.cce_2214(PF00504)not used
43989.cce_2215(PF03055)
43989.cce_1106(PF11282)
43989.cce_1101PF13359
43989.cce_1109(PF05685)
43989.cce_4556(PF03567)
43989.cce_4550(PF03567)
43989.cce_4330(PF10664)
43989.cce_4335(PF13358)
43989.cce_4334(PF13592)
43989.cce_5063(PF00773)
43989.cce_2485(PF00124)
43989.cce_5116PF13359
43989.cce_2648PF00305
43989.cce_2469(PF05685)
43989.cce_3844(PF02656)
43989.cce_3845(PF02656)
43989.cce_3846(PF02656)
43989.cce_3843(PF02656)
43989.cce_2262PF13384
43989.cce_2260(PF13358)
43989.cce_2265(PF11360)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================