Effective results for Halothermothrix orenii H 168 (eggnog40)

Summary

Number of putative secreted proteins: 42
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 42 proteins (6 high, 36 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
373903.Hore_15940(PF01094)ER
373903.Hore_02490(PF01871)(mitochondrial)
373903.Hore_18730(PF09154)ER
373903.Hore_05360PF12349(ER)
373903.Hore_18240(PF09154)ER
373903.Hore_01535(PF01871)(mitochondrial)
373903.Hore_20540(PF12862)(mitochondrial)
373903.Hore_01810(PF01257) (PF02906) (PF02256)
373903.Hore_06330(PF02906) (PF02256)
373903.Hore_03490(PF02732)(mitochondrial)
373903.Hore_04170(PF06165) (PF17167)
373903.Hore_02980(PF02906) (PF02256)
373903.Hore_19760(PF06165) (PF17167)
373903.Hore_15430(PF05034) (PF07476)
373903.Hore_19750(PF06165) (PF17167)
373903.Hore_05910(PF02421)
373903.Hore_06320(PF01257)
373903.Hore_05070(PF02421)
373903.Hore_02950(PF02906)
373903.Hore_01770(PF02906)
373903.Hore_01790(PF01257)
373903.Hore_06310(PF01257)
373903.Hore_19410(PF01991)
373903.Hore_13350(PF02421)
373903.Hore_00200PF10494
373903.Hore_16020(PF16760)
373903.Hore_02960(PF01257)
373903.Hore_01520PF00380
373903.Hore_17470(PF03652)
373903.Hore_15410(PF14330)
373903.Hore_01510PF00572
373903.Hore_05800(PF03652)
373903.Hore_18210(PF00862)
373903.Hore_02460PF00572
373903.Hore_02080(PF01257)
373903.Hore_19950(PF03266)
373903.Hore_02060(PF02906)
373903.Hore_01800(PF01257)
373903.Hore_02470PF00380
373903.Hore_02090(PF02906)
373903.Hore_02710(PF02421)
373903.Hore_02870(PF02906)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================