Effective results for Streptococcus salivarius 57.I (eggnog40)

Summary

Number of putative secreted proteins: 29
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 29 proteins (2 high, 27 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
1046629.Ssal_01158				(PF06176)	(mitochondrial)
1046629.Ssal_00871				PF02210	ER
1046629.Ssal_01473				(PF01501)	(ER)
1046629.Ssal_00686				(PF01501)	mitochondrial
1046629.Ssal_00692				(PF00344)	ER
1046629.Ssal_01182				PF02916	ER
1046629.Ssal_00104				(PF00344)	mitochondrial
1046629.Ssal_00039				(PF01610)
1046629.Ssal_01039				(PF13936)
1046629.Ssal_01150				(PF13936)
1046629.Ssal_01932				(PF01610)
1046629.Ssal_00995				(PF13936)
1046629.Ssal_01238				(PF13936)
1046629.Ssal_02110				(PF13936)
1046629.Ssal_00895				(PF13936)
1046629.Ssal_01691				(PF01610)
1046629.Ssal_00336				(PF01610)
1046629.Ssal_02124				(PF13936)
1046629.Ssal_00680				(PF01501)
1046629.Ssal_00682				(PF01501)
1046629.Ssal_00688				(PF01501)
1046629.Ssal_02075				(PF13936)
1046629.Ssal_00690				(PF01501)
1046629.Ssal_00208				(PF01610)
1046629.Ssal_01997				(PF01610)
1046629.Ssal_01166				(PF01610)
1046629.Ssal_00540				(PF01610)
1046629.Ssal_00544				(PF13936)
1046629.Ssal_01370				(PF01610)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================